MINERVA
Platform Documentation

List of the additionally supported annotations#

Annotation database [A-K] Annotation database [L-Z]
ABS Ligand Expo
Aceview Worm Ligand-Gated Ion Channel database
Affymetrix Probeset LigandBox
AFTOL LINCS Cell
Allergome LINCS Protein
AmoebaDB Locus Reference Genomic
Anatomical Therapeutic Chemical MACiE
Anatomical Therapeutic Chemical Vetinary MaizeGDB Locus
Animal Diversity Web MassBank
Animal Genome Cattle QTL Mathematical Modelling Ontology
Animal Genome Chicken QTL MatrixDB
Animal Genome Pig QTL MedlinePlus
Animal Genome Sheep QTL MEROPS
Animal TFDB Family MEROPS Family
Antibiotic Resistance Genes Database MEROPS Inhibitor
Antibody MetaboLights
AntWeb MetaNetX chemical
APD MetaNetX compartment
AphidBase Transcript MetaNetX reaction (#1610)
ArachnoServer METLIN
ArrayExpress MGED Ontology
ArrayExpress Platform Microbial Protein Interaction Database
arXiv MicrosporidiaDB
ASAP MimoDB
AspGD Locus MINT
AspGD Protein MIPModDB
ATCC mirEX
AutDB MIRIAM Registry collection
BacMap Biography MIRIAM Registry resource
BacMap Map miRNEST
BDGP EST MMRRC
BDGP insertion DB ModelDB
BeetleBase Molbase
Bgee family Molecular Interactions Ontology
Bgee gene Molecular Modeling Database
Bgee organ Mouse Adult Gross Anatomy
Bgee stage MycoBank
BindingDB MycoBrowser leprae
BioCarta Pathway MycoBrowser marinum
BioCatalogue MycoBrowser smegmatis
BioCyc MycoBrowser tuberculosis
BioGRID NAPP
BioNumbers NARCIS
BioPortal NASC code
BioProject National Bibliography Number
BioSample National Drug Code
BioSystems NCI Pathway Interaction Database: Pathway
BitterDB Compound NCIm
BitterDB Receptor NCIt
BOLD Taxonomy NeuroLex
Brenda Tissue Ontology NeuroMorpho
Broad Fungal Genome Initiative NeuronDB
BugBase Expt NEXTDB
BugBase Protocol nextProt
BYKdb NIAEST
Canadian Drug Product Database NITE Biological Research Center Catalogue
Candida Genome Database NONCODE v3
CAPS-DB NONCODE v4 Gene
CATH domain NONCODE v4 Transcript
CATH superfamily NORINE
Cell Cycle Ontology NucleaRDB
Cell Image Library Nucleotide Sequence Database
Cell Signaling Technology Antibody Odor Molecules DataBase
Cell Signaling Technology Pathways Olfactory Receptor Database
Cell Type Ontology OMA Group
CGSC Strain OMA Protein
CharProt OMIA
ChemDB OMIT
CLDB Ontology of Physics for Biology
ClinVar Record OPM
COMBINE specifications ORCID
Compulyeast OriDB Saccharomyces
Conoserver OriDB Schizosaccharomyces
Conserved Domain Database Orphanet
Cooperative Patent Classification Orphanet Rare Disease Ontology
Coriell Cell Repositories OrthoDB
CORUM Oryza Tag Line
CryptoDB Oryzabase Gene
CSA Oryzabase Mutant
CTD Disease Oryzabase Stage
CTD Gene Oryzabase Strain
Cube db P3DB Protein
CutDB P3DB Site
DailyMed PaleoDB
DARC PANTHER Node
Database of Interacting Proteins PANTHER Pathway
Database of Quantitative Cellular Signaling: Model PANTHER Pathway Component
Database of Quantitative Cellular Signaling: Pathway PASS2
DATF Pathway Commons
DBD Pathway Ontology
dbEST PaxDb Organism
DBG2 Introns PaxDb Protein
dbProbe Pazar Transcription Factor
Degradome Database PeptideAtlas
DEPOD Peroxibase
Dictybase EST PharmGKB Disease
Dictybase Gene PharmGKB Drug
DisProt PharmGKB Gene
DOMMINO Phenol-Explorer
DOOR PhosphoPoint Kinase
DPV PhosphoPoint Phosphoprotein
DragonDB Allele PhosphoSite Protein
DragonDB DNA PhosphoSite Residue
DragonDB Locus PhylomeDB
DragonDB Protein Phytozome Locus
DRSC PINA
EchoBASE PiroplasmaDB
EcoliWiki PIRSF
EDAM Ontology Plant Ontology
eggNOG PlasmoDB
ELM PMP
ENA Pocketome
Ensembl Bacteria PolBase
Ensembl Fungi PomBase
Ensembl Metazoa PRIDE
Ensembl Protists PRIDE Project
enviPath PRINTS
EPD ProDom
European Genome-phenome Archive Dataset ProGlycProt
European Genome-phenome Archive Study PROSITE
ExAC Gene ProtClustDB
ExAC Transcript Protein Affinity Reagents
ExAC Variant Protein Data Bank Ligand
Experimental Factor Ontology Protein Model Database
F-SNP Protein Ontology
FMA ProteomicsDB Peptide
FooDB Compound ProteomicsDB Protein
FuncBase Fly ProtoNet Cluster
FuncBase Human ProtoNet ProteinCard
FuncBase Mouse PSCDB
FuncBase Yeast Pseudomonas Genome Database
FungiDB PubChem-bioassay
GABI Rat Genome Database qTL
Genatlas Rat Genome Database strain
Gene Wiki REBASE
GeneCards Registry
GeneFarm Relation Ontology
GeneTree RESID
Genome Properties RFAM
GenPept Rice Genome Annotation Project
GEO RNA Modification Database
GiardiaDB Rouge
GLIDA GPCR SABIO-RK EC Record
GLIDA Ligand SABIO-RK Kinetic Record
GlycoEpitope SABIO-RK Reaction
GlycomeDB Saccharomyces genome database pathways
GOA SBML RDF Vocabulary
GOLD genome ScerTF
GOLD metadata SCOP
Golm Metabolome Database SEED Compound
Golm Metabolome Database Analyte SEED Reactions
Golm Metabolome Database GC-MS spectra Sequence Ontology
Golm Metabolome Database Profile Sequence Read Archive
Golm Metabolome Database Reference Substance SIDER Drug
Google Patents SIDER Side Effect
GPCRDB Signaling Gateway
Gramene genes SitEx
Gramene protein Small Molecule Pathway Database
Gramene QTL SMART
Gramene Taxonomy SNOMED CT
GreenGenes Sol Genomics Network
GRIN Plant Taxonomy SoyBase
GRSDB Spectral Database for Organic Compounds
GWAS Central Marker STAP
GWAS Central Phentoype SubstrateDB
GWAS Central Study SubtiList
GXA Expt SubtiWiki
GXA Gene SUPFAM
H-InvDb Locus SwissLipids
H-InvDb Protein T3DB
H-InvDb Transcript TAIR Gene
HAMAP TAIR Protein
HCVDB TarBase
HGMD TEDDY
HGNC Family Tetrahymena Genome Database
HOGENOM TIGRFAMS
HOMD Sequence Metainformation Tissue List
HOMD Taxonomy TOPDB
Homeodomain Research TopFind
HomoloGene ToxoDB
HOVERGEN Transport Classification Database
HPA Tree of Life
HPRD TreeBASE
HSSP TreeFam
HUGE TrichDB
Human Phenotype Ontology TriTrypDB
Human Proteome Map Peptide TTD Target
Human Proteome Map Protein UBERON
ICD uBio NameBank
ICEberg element UM-BBD Biotransformation Rule
ICEberg family UM-BBD Compound
IDEAL UM-BBD Enzyme
Identifiers.org Terms UM-BBD Pathway
IMEx UM-BBD Reaction
IMGT LIGM UNII
InChI Unimod
InChIKey UniParc
IntAct Molecule UniPathway Reaction
Integrated Microbial Genomes Gene UniSTS
Integrated Microbial Genomes Taxon Unite
IRD Segment Sequence USPTO
iRefWeb VariO
ISBN Vbase2
ISFinder VBRC
ISSN VFDB Gene
IUPHAR family VFDB Genus
IUPHAR receptor ViralZone
Japan Chemical Substance Dictionary VIRsiRNA
Japan Collection of Microorganisms WikiGenes
JAX Mice Worfdb
JCGGDB WormBase RNAi
JSTOR Wormpep
JWS Online Xenbase
KEGG Disease YDPM
KEGG Environ Yeast Intron Database v3
KEGG Genome Yeast Intron Database v4.3
KEGG Metagenome YeTFasCo
KEGG Module YRC PDR
KiSAO ZINC