Data / Reactions#

The methods contained within ‘Data / Reactions’ are used to access raw reaction data for all currently loaded submaps.

getAll#

• accepts no arguments

• triggers loading of reaction data for any submap it hasn’t been fetched for yet, waits until all submaps have finished loading, then resolves

• returns a Promise resolving to an array of NewReaction, combining the reactions of every loaded submap

• example:

  const reactions = await window.minerva.reactions.data.getAll();

Changes in version 22.0#

New fields of NewReaction:

• map - the id of the map the reaction belongs to; it replaces model
• line.colorRgba - the color of the reaction line as a #RRGGBBAA string (example: '#000000FF')

Deprecated fields, still provided so that plugins written for version 21 keep working:

• model - use map
• line.color - color object { alpha, rgb }; use line.colorRgba
• abbreviation, formula, geneProteinReaction, lowerBound, upperBound, mechanicalConfidenceScore, subsystem, symbol and synonyms - always null (synonyms always empty), the VMH (Recon) annotator that provided them was removed
• in references: annotatorClassName - use annotator, which contains the name of the annotator (example: 'HGNC') instead of a Java class name; annotatorClassName now contains the same name