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CellDesigner → SBOTerms matching list
Species
CellDesigner terms |
SBOTerm |
SBOTerm name |
Antisense Rna |
SBO:0000334 |
non-coding RNA |
Complex |
SBO:0000253 |
non-covalent complex |
Hypothetical complex |
SBO:0000289 |
functional compartment |
Degraded |
SBO:0000291 |
empty set |
Drug |
SBO:0000298 |
synthetic chemical compound |
Gene |
SBO:0000243 |
gene |
Generic protein |
SBO:0000252 |
polypeptide chain |
Ion |
SBO:0000327 |
non-macromolecular ion |
Ion channel |
SBO:0000284 |
transporter |
Phenotype |
SBO:0000358 |
phenotype |
Receptor |
SBO:0000244 |
receptor |
Rna |
SBO:0000278 |
messenger RNA |
Small molecule |
SBO:0000247 |
simple chemical |
Truncated protein |
SBO:0000252 |
polypeptide chain |
Unknown |
SBO:0000285 |
material entity of unspecified nature |
Modifiers
CellDesigner terms |
SBOTerm |
SBOTerm name |
Catalysis |
SBO:0000013 |
catalyst |
Inhibition |
SBO:0000537 |
complete inhibitor |
Modulation |
SBO:0000594 |
neutral participant |
Physical stimulation |
SBO:0000459 |
stimulator |
Trigger |
SBO:0000461 |
essential activator |
Unknown catalysis |
SBO:0000462 |
non-essential activator |
Unknown Inhibition |
SBO:0000536 |
partial inhibitor |
Reaction (process description)
CellDesigner terms |
SBOTerm |
SBOTerm name |
Dissociation |
SBO:0000180 |
dissociation |
Heterodimer association |
SBO:0000177 |
non-covalent binding |
Known transition omitted |
SBO:0000395 |
encapsulating process |
State transition |
SBO:0000176 |
biochemical reaction |
Transcription |
SBO:0000183 |
transcription |
Translation |
SBO:0000184 |
translation |
Transport |
SBO:0000185 |
translocation reaction |
Truncation |
SBO:0000178 |
cleavage |
Unknown transition |
SBO:0000396 |
uncertain process |
Reaction (activity flow)
CellDesigner terms |
SBOTerm |
SBOTerm name |
Negative influence |
SBO:0000407 |
absolute inhibition |
Positive influence |
SBO:0000171 |
necessary stimulation |
Reduced modulation |
SBO:0000344 |
molecular interaction |
Reduced physical stimulation |
SBO:0000411 |
absolute stimulation |
Reduced trigger |
SBO:0000168 |
control |
Unknown negative influence |
SBO:0000169 |
inhibition |
Unknown positive influence |
SBO:0000172 |
catalysis |
Unknown reduced modulation |
SBO:0000342 |
molecular or genetic interaction |
Unknown reduced physical stimulation |
SBO:0000170 |
stimulation |
Unknown reduced trigger |
SBO:0000205 |
composite biochemical process |
Boolean logic gates
CellDesigner terms |
SBOTerm |
SBOTerm name |
Boolean Logic Gate And |
SBO:0000173 |
and |
Boolean Logic Gate Or |
SBO:0000174 |
or |
Boolean Logic Gate Not |
SBO:0000238 |
not |
Boolean Logic Gate Unknown |
SBO:0000398 |
logical relationship |